CDS

Accession Number TCMCG057C42422
gbkey CDS
Protein Id XP_018443716.1
Location complement(join(<24238126..24238915,24239001..24239533,24239623..24239800,24239902..24240102,24240573..24240748))
Gene LOC108815693
GeneID 108815693
Organism Raphanus sativus

Protein

Length 626aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018588214.1
Definition PREDICTED: chloride channel protein CLC-a-like, partial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category P
Description Chloride channel protein
KEGG_TC 2.A.49.3.3
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko04040        [VIEW IN KEGG]
KEGG_ko ko:K05016        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000325        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005216        [VIEW IN EMBL-EBI]
GO:0005244        [VIEW IN EMBL-EBI]
GO:0005247        [VIEW IN EMBL-EBI]
GO:0005253        [VIEW IN EMBL-EBI]
GO:0005254        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006821        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008308        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0008509        [VIEW IN EMBL-EBI]
GO:0009671        [VIEW IN EMBL-EBI]
GO:0009705        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010167        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015077        [VIEW IN EMBL-EBI]
GO:0015078        [VIEW IN EMBL-EBI]
GO:0015103        [VIEW IN EMBL-EBI]
GO:0015108        [VIEW IN EMBL-EBI]
GO:0015112        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0015291        [VIEW IN EMBL-EBI]
GO:0015293        [VIEW IN EMBL-EBI]
GO:0015294        [VIEW IN EMBL-EBI]
GO:0015295        [VIEW IN EMBL-EBI]
GO:0015296        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015513        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0015698        [VIEW IN EMBL-EBI]
GO:0015706        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022804        [VIEW IN EMBL-EBI]
GO:0022832        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022838        [VIEW IN EMBL-EBI]
GO:0022839        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098656        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098661        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902476        [VIEW IN EMBL-EBI]
GO:1902600        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGAAGATGGAAACTTACAGATTAGTAATAGTAATTACAATGGAGAAGAAGAAGCAGATCCAGAGAATAACACTATGAACCAGCCACTCCTTAAGAGACATAGAACTCTTTCTTCAACTCCTCTTGCTTTGGTTGGTACCAAGGTTTCACACATCGAGAGCTTAGATTATGAAATAAACGAGAATGATCTGTTCAAGCACGACTGGAGAAGCAGATCAAAGGCACAAGTGTTGCAATACATATTCGCAAAATGGACATTAGCGTTTCTTGTTGGTCTCTTAACTGGTCTCATAGCTACTCTCATCAACCTCGCCGTCGAAAACATCGCCGGTTACAAACTCCTAGCCGTCGGCCACTATATCGCTCAAGACAGGTTTGTTACAGGTCTGCTGGTCTTTACGGGTGCGAATTTGGGTCTGACTTTGGTGGCGACAGTACTTGTTGTTGTCTTTGCTCCTACGGCTGCTGGTCCTGGGATTCCAGAGATTAAAGCTTATCTTAATGGCATCGACACTCCTAATATGTTTGGTGCCACCACCATGATCGTTAAGATTGTTGGAAGTATTGGAGCAGTTGCAGCTGGACTTGATCTTGGCAAAGAAGGGCCTTTGGTTCACATTGGAAGCTGCATAGCTTCTTTGCTAGGTCAAGGTGGACCAGACAACCACAGAATCAAATGGAGATGGCTTCGTTACTTCAACAACGACAGAGACCGAAGAGATCTTATTACATGTGGATCTGCCTCTGGAGTATGTGCAGCTTTCAGGTCACCAGTAGGAGGAGTTCTCTTCGCTCTTGAGGAAGTTGCCACGTGGTGGAGAAGCGCTCTTCTATGGAGAACCTTCTTCAGTACAGCTGTTGTCGTGGTTGTACTGAGAGCGTTCATAGAGATTTGCAACTCCGGTAAATGCGGGCTCTTCGGCAAAGGAGGACTCATCATGTTTGATGTGAGTCATGTAGAGGTTAGGTACCATGCAGTGGATATAATCCCTGTTACATTGATTGGTGTCATTGGTGGCATTCTTGGAAGTTTGTACAATCACCTTCTTCATAAAGTCCTTCGTCTTTACAATCTCATCAATCAGAAGGGTAAGATTCACAAGGTGCTTCTAAGTCTTTCGGTGTCTCTCTTCACATCACTTTGCTTGTATGGGCTTCCTTTCTTAGCGGAATGCAAGCCTTGTAATCCTTCAATAGACGAGGCATGTCCAACAAACGGAAGATCAGGGAACTTCAAGCAGTTCAACTGTCCCAACGGTTACTACAACGATCTAGCGACTCTGTTTCTCACAACCAACGATGATGCAGTCAGAAACGTGTTCTCATCAAACACTCCTAATGAGTTTGGTATGGTTTCCCTGTGGATATACTTTGGCCTCTACTGCATTTTGGGGCTTATCACATTTGGTATAGCGACGCCTTCCGGTCTCTTCTTACCGATCATCCTCATGGGTTCTGCGTATGGTCGGATGCTAGGCACGGTAATGGGACCTTACACAAAGATTGATCAAGGGCTTTACGCGGTTCTTGGTGCAGCTTCACTCATGGCTGGTTCCATGAGAATGACTGTTTCTCTCTGTGTTATATTCCTTGAGCTCACCAACAACCTTCTTTTGTTACCCATTACAATGTTTGTGCTTCTCATTGCTAAAACAGTTGGAGACAGCTTCAATCTGAGTATCTATGAGATCATTCTCCATCTGAAGGGCTTACCATTCTTGGAAGCAAATCCAGAGCCATGGATGAGGAATCTCACTGTAGGTGAGCTTGGTGATGCTAAGCCTCCGGTGGTTACACTTGGCGGAGTAGAAAAAGTTGCTAATATAGTGGATGCACTAAGGAACACAACGCATAACGCCTTCCCGGTATTGGAC
Protein:  
MDEDGNLQISNSNYNGEEEADPENNTMNQPLLKRHRTLSSTPLALVGTKVSHIESLDYEINENDLFKHDWRSRSKAQVLQYIFAKWTLAFLVGLLTGLIATLINLAVENIAGYKLLAVGHYIAQDRFVTGLLVFTGANLGLTLVATVLVVVFAPTAAGPGIPEIKAYLNGIDTPNMFGATTMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRDRRDLITCGSASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGKCGLFGKGGLIMFDVSHVEVRYHAVDIIPVTLIGVIGGILGSLYNHLLHKVLRLYNLINQKGKIHKVLLSLSVSLFTSLCLYGLPFLAECKPCNPSIDEACPTNGRSGNFKQFNCPNGYYNDLATLFLTTNDDAVRNVFSSNTPNEFGMVSLWIYFGLYCILGLITFGIATPSGLFLPIILMGSAYGRMLGTVMGPYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEANPEPWMRNLTVGELGDAKPPVVTLGGVEKVANIVDALRNTTHNAFPVLD